Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Casc4Q6P2L7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Casc4Q6P2L7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Casc4Q6P2L7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Casc4Q6P2L7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Casc4Q6P2L7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Casc4Q6P2L7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Casc4Q6P2L7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Casc4Q6P2L7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.52■□□□□ 0.4
Casc4Q6P2L7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms