Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Idnk-204ENSMUST00000226010 1898 ntBASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm4Q6IRU2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm4Q6IRU2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm4Q6IRU2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.42■□□□□ 0.7
Tpm4Q6IRU2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Gm2399-201ENSMUST00000104944 225 ntBASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Gm6211-202ENSMUST00000167849 925 ntBASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Gm42569-201ENSMUST00000200539 472 ntBASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm4Q6IRU2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Gm7291-201ENSMUST00000199147 382 ntBASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm4Q6IRU2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tpm4Q6IRU2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tpm4Q6IRU2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm4Q6IRU2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm4Q6IRU2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm4Q6IRU2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm4Q6IRU2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm4Q6IRU2 Gm18284-201ENSMUST00000172604 624 ntBASIC19.39■□□□□ 0.69
Tpm4Q6IRU2 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.39■□□□□ 0.69
Tpm4Q6IRU2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms