Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pds5aQ6A026 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pds5aQ6A026 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pds5aQ6A026 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.68■□□□□ 0.58
Pds5aQ6A026 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Mir7071-201ENSMUST00000184847 69 ntBASIC18.68■□□□□ 0.58
Pds5aQ6A026 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Pds5aQ6A026 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Gm13559-201ENSMUST00000120476 863 ntBASIC18.67■□□□□ 0.58
Pds5aQ6A026 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Gm9731-201ENSMUST00000209480 747 ntBASIC18.67■□□□□ 0.58
Pds5aQ6A026 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.67■□□□□ 0.58
Pds5aQ6A026 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pds5aQ6A026 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.67■□□□□ 0.58
Pds5aQ6A026 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Gm27463-201ENSMUST00000183569 57 ntBASIC18.66■□□□□ 0.58
Pds5aQ6A026 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Il3ra-202ENSMUST00000223589 738 ntBASIC18.66■□□□□ 0.58
Pds5aQ6A026 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pds5aQ6A026 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pds5aQ6A026 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.65■□□□□ 0.58
Pds5aQ6A026 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pds5aQ6A026 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pds5aQ6A026 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.64■□□□□ 0.58
Pds5aQ6A026 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
Pds5aQ6A026 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Gm7791-201ENSMUST00000219066 539 ntBASIC18.64■□□□□ 0.57
Pds5aQ6A026 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.64■□□□□ 0.57
Pds5aQ6A026 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pds5aQ6A026 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pds5aQ6A026 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pds5aQ6A026 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.63■□□□□ 0.57
Pds5aQ6A026 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pds5aQ6A026 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.63■□□□□ 0.57
Pds5aQ6A026 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms