Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.22■□□□□ 0.51
Scube3Q66PY1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Gm30025-201ENSMUST00000218555 728 ntBASIC18.22■□□□□ 0.51
Scube3Q66PY1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.22■□□□□ 0.51
Scube3Q66PY1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.22■□□□□ 0.51
Scube3Q66PY1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scube3Q66PY1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.21■□□□□ 0.51
Scube3Q66PY1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.21■□□□□ 0.51
Scube3Q66PY1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube3Q66PY1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Scube3Q66PY1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scube3Q66PY1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Gm7638-201ENSMUST00000121348 967 ntBASIC18.19■□□□□ 0.5
Scube3Q66PY1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.19■□□□□ 0.5
Scube3Q66PY1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube3Q66PY1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.19■□□□□ 0.5
Scube3Q66PY1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.18■□□□□ 0.5
Scube3Q66PY1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.17■□□□□ 0.5
Scube3Q66PY1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.17■□□□□ 0.5
Scube3Q66PY1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.17■□□□□ 0.5
Scube3Q66PY1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scube3Q66PY1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.16■□□□□ 0.5
Scube3Q66PY1 Gm11539-201ENSMUST00000119837 557 ntBASIC18.16■□□□□ 0.5
Scube3Q66PY1 Gm13436-201ENSMUST00000120418 567 ntBASIC18.16■□□□□ 0.5
Scube3Q66PY1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.16■□□□□ 0.5
Scube3Q66PY1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube3Q66PY1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms