Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.66■□□□□ 0.26
Sdc3Q64519 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Gm13401-201ENSMUST00000117074 291 ntBASIC16.66■□□□□ 0.26
Sdc3Q64519 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Gm30025-201ENSMUST00000218555 728 ntBASIC16.66■□□□□ 0.26
Sdc3Q64519 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc3Q64519 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc3Q64519 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sdc3Q64519 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
Sdc3Q64519 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Sdc3Q64519 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sdc3Q64519 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Timm23-208ENSMUST00000226683 750 ntBASIC16.65■□□□□ 0.26
Sdc3Q64519 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sdc3Q64519 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdc3Q64519 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sdc3Q64519 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc3Q64519 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.64■□□□□ 0.26
Sdc3Q64519 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.64■□□□□ 0.25
Sdc3Q64519 Gm43799-201ENSMUST00000201845 579 ntBASIC16.64■□□□□ 0.25
Sdc3Q64519 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc3Q64519 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sdc3Q64519 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sdc3Q64519 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms