Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six1Q62231 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six1Q62231 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.82■□□□□ 0.44
Six1Q62231 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.82■□□□□ 0.44
Six1Q62231 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Six1Q62231 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Six1Q62231 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.82■□□□□ 0.44
Six1Q62231 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six1Q62231 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six1Q62231 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Six1Q62231 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.81■□□□□ 0.44
Six1Q62231 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.81■□□□□ 0.44
Six1Q62231 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Six1Q62231 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.81■□□□□ 0.44
Six1Q62231 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Six1Q62231 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six1Q62231 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.8■□□□□ 0.44
Six1Q62231 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six1Q62231 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Six1Q62231 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.79■□□□□ 0.44
Six1Q62231 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.79■□□□□ 0.44
Six1Q62231 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Six1Q62231 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.79■□□□□ 0.44
Six1Q62231 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Six1Q62231 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six1Q62231 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six1Q62231 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Six1Q62231 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.78■□□□□ 0.44
Six1Q62231 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Six1Q62231 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Six1Q62231 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six1Q62231 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Six1Q62231 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six1Q62231 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Six1Q62231 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.78■□□□□ 0.44
Six1Q62231 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six1Q62231 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six1Q62231 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Six1Q62231 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six1Q62231 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.77■□□□□ 0.44
Six1Q62231 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six1Q62231 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six1Q62231 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Six1Q62231 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.77■□□□□ 0.44
Six1Q62231 Gm18025-201ENSMUST00000221733 862 ntBASIC17.77■□□□□ 0.44
Six1Q62231 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six1Q62231 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Six1Q62231 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six1Q62231 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six1Q62231 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Six1Q62231 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Six1Q62231 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Six1Q62231 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Six1Q62231 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms