Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.36■□□□□ 0.21
VcanQ62059 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VcanQ62059 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.35■□□□□ 0.21
VcanQ62059 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
VcanQ62059 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
VcanQ62059 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.35■□□□□ 0.21
VcanQ62059 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VcanQ62059 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Gm37722-201ENSMUST00000193757 208 ntBASIC16.34■□□□□ 0.21
VcanQ62059 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VcanQ62059 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Il3ra-202ENSMUST00000223589 738 ntBASIC16.34■□□□□ 0.21
VcanQ62059 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VcanQ62059 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VcanQ62059 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VcanQ62059 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VcanQ62059 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VcanQ62059 Gm14494-201ENSMUST00000118786 435 ntBASIC16.34■□□□□ 0.21
VcanQ62059 Gm15920-201ENSMUST00000118998 402 ntBASIC16.34■□□□□ 0.21
VcanQ62059 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.34■□□□□ 0.21
VcanQ62059 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.34■□□□□ 0.21
VcanQ62059 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.34■□□□□ 0.21
VcanQ62059 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.33■□□□□ 0.21
VcanQ62059 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VcanQ62059 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.33■□□□□ 0.2
VcanQ62059 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
VcanQ62059 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VcanQ62059 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VcanQ62059 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.33■□□□□ 0.2
VcanQ62059 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VcanQ62059 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VcanQ62059 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VcanQ62059 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VcanQ62059 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VcanQ62059 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VcanQ62059 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VcanQ62059 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VcanQ62059 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VcanQ62059 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.32■□□□□ 0.2
VcanQ62059 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.32■□□□□ 0.2
VcanQ62059 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VcanQ62059 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.32■□□□□ 0.2
VcanQ62059 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VcanQ62059 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.32■□□□□ 0.2
VcanQ62059 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.32■□□□□ 0.2
VcanQ62059 Gm4974-201ENSMUST00000209974 875 ntBASIC16.32■□□□□ 0.2
VcanQ62059 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VcanQ62059 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VcanQ62059 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VcanQ62059 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VcanQ62059 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.32■□□□□ 0.2
VcanQ62059 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.32■□□□□ 0.2
VcanQ62059 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.32■□□□□ 0.2
VcanQ62059 Gm15372-201ENSMUST00000120729 834 ntBASIC16.32■□□□□ 0.2
VcanQ62059 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
VcanQ62059 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VcanQ62059 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VcanQ62059 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VcanQ62059 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
VcanQ62059 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.31■□□□□ 0.2
VcanQ62059 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
VcanQ62059 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.31■□□□□ 0.2
VcanQ62059 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.31■□□□□ 0.2
VcanQ62059 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.31■□□□□ 0.2
VcanQ62059 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.31■□□□□ 0.2
VcanQ62059 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VcanQ62059 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms