Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift88Q61371 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift88Q61371 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift88Q61371 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.25■□□□□ 0.67
Ift88Q61371 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ift88Q61371 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift88Q61371 Gm11927-201ENSMUST00000118472 759 ntBASIC19.25■□□□□ 0.67
Ift88Q61371 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ift88Q61371 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.25■□□□□ 0.67
Ift88Q61371 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ift88Q61371 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ift88Q61371 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.24■□□□□ 0.67
Ift88Q61371 Gm13401-201ENSMUST00000117074 291 ntBASIC19.24■□□□□ 0.67
Ift88Q61371 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.24■□□□□ 0.67
Ift88Q61371 Rab3c-203ENSMUST00000224180 967 ntBASIC19.24■□□□□ 0.67
Ift88Q61371 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ift88Q61371 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ift88Q61371 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.23■□□□□ 0.67
Ift88Q61371 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ift88Q61371 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.23■□□□□ 0.67
Ift88Q61371 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.23■□□□□ 0.67
Ift88Q61371 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ift88Q61371 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ift88Q61371 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.23■□□□□ 0.67
Ift88Q61371 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.22■□□□□ 0.67
Ift88Q61371 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ift88Q61371 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.22■□□□□ 0.67
Ift88Q61371 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.22■□□□□ 0.67
Ift88Q61371 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.22■□□□□ 0.67
Ift88Q61371 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ift88Q61371 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ift88Q61371 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ift88Q61371 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ift88Q61371 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift88Q61371 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift88Q61371 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift88Q61371 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ift88Q61371 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift88Q61371 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ift88Q61371 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.21■□□□□ 0.67
Ift88Q61371 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.21■□□□□ 0.67
Ift88Q61371 Mtag2-201ENSMUST00000058665 714 ntBASIC19.21■□□□□ 0.67
Ift88Q61371 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift88Q61371 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift88Q61371 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift88Q61371 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ift88Q61371 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.21■□□□□ 0.67
Ift88Q61371 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Ift88Q61371 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.2■□□□□ 0.66
Ift88Q61371 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.2■□□□□ 0.66
Ift88Q61371 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ift88Q61371 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ift88Q61371 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms