Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.62■■□□□ 1.05
Irf9Q61179 Mir1668-201ENSMUST00000184114 107 ntBASIC21.62■■□□□ 1.05
Irf9Q61179 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.62■■□□□ 1.05
Irf9Q61179 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Irf9Q61179 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
Irf9Q61179 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Irf9Q61179 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.62■■□□□ 1.05
Irf9Q61179 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Irf9Q61179 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Irf9Q61179 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Irf9Q61179 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Irf9Q61179 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Irf9Q61179 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Irf9Q61179 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.61■■□□□ 1.05
Irf9Q61179 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Irf9Q61179 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Irf9Q61179 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.61■■□□□ 1.05
Irf9Q61179 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Irf9Q61179 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.61■■□□□ 1.05
Irf9Q61179 Gm7213-201ENSMUST00000215977 950 ntBASIC21.61■■□□□ 1.05
Irf9Q61179 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Irf9Q61179 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Irf9Q61179 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Irf9Q61179 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Irf9Q61179 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Irf9Q61179 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.6■■□□□ 1.05
Irf9Q61179 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.6■■□□□ 1.05
Irf9Q61179 AA414768-201ENSMUST00000121924 1257 ntBASIC21.6■■□□□ 1.05
Irf9Q61179 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.6■■□□□ 1.05
Irf9Q61179 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Irf9Q61179 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Irf9Q61179 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Irf9Q61179 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Irf9Q61179 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Irf9Q61179 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Irf9Q61179 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.59■■□□□ 1.05
Irf9Q61179 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Irf9Q61179 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.59■■□□□ 1.05
Irf9Q61179 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Irf9Q61179 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Irf9Q61179 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.59■■□□□ 1.05
Irf9Q61179 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Irf9Q61179 Gm21559-201ENSMUST00000220638 855 ntBASIC21.59■■□□□ 1.05
Irf9Q61179 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
Irf9Q61179 Gm8587-201ENSMUST00000076538 843 ntBASIC21.59■■□□□ 1.05
Irf9Q61179 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Irf9Q61179 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Irf9Q61179 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Irf9Q61179 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Irf9Q61179 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Irf9Q61179 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Irf9Q61179 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Irf9Q61179 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Irf9Q61179 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Irf9Q61179 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Irf9Q61179 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.58■■□□□ 1.05
Irf9Q61179 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Irf9Q61179 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.58■■□□□ 1.05
Irf9Q61179 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Irf9Q61179 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Irf9Q61179 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
Irf9Q61179 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Gm6345-202ENSMUST00000180900 204 ntBASIC21.57■■□□□ 1.04
Irf9Q61179 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.57■■□□□ 1.04
Irf9Q61179 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Irf9Q61179 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Irf9Q61179 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Irf9Q61179 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Irf9Q61179 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Irf9Q61179 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Irf9Q61179 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.56■■□□□ 1.04
Irf9Q61179 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Irf9Q61179 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Irf9Q61179 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Irf9Q61179 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.56■■□□□ 1.04
Irf9Q61179 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Irf9Q61179 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Irf9Q61179 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Irf9Q61179 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms