Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sdf4Q61112 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.63■□□□□ 0.41
Sdf4Q61112 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sdf4Q61112 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdf4Q61112 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.62■□□□□ 0.41
Sdf4Q61112 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sdf4Q61112 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Sdf4Q61112 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Sdf4Q61112 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 Gm10812-201ENSMUST00000099864 546 ntBASIC17.62■□□□□ 0.41
Sdf4Q61112 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.62■□□□□ 0.41
Sdf4Q61112 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdf4Q61112 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.61■□□□□ 0.41
Sdf4Q61112 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.61■□□□□ 0.41
Sdf4Q61112 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sdf4Q61112 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.61■□□□□ 0.41
Sdf4Q61112 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Sdf4Q61112 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.61■□□□□ 0.41
Sdf4Q61112 Gm10517-202ENSMUST00000192970 758 ntBASIC17.61■□□□□ 0.41
Sdf4Q61112 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Sdf4Q61112 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sdf4Q61112 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Rarb-207ENSMUST00000225921 2756 ntBASIC17.61■□□□□ 0.41
Sdf4Q61112 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sdf4Q61112 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdf4Q61112 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.6■□□□□ 0.41
Sdf4Q61112 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.6■□□□□ 0.41
Sdf4Q61112 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sdf4Q61112 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdf4Q61112 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sdf4Q61112 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.59■□□□□ 0.41
Sdf4Q61112 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.59■□□□□ 0.41
Sdf4Q61112 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Sdf4Q61112 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.59■□□□□ 0.41
Sdf4Q61112 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.59■□□□□ 0.41
Sdf4Q61112 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sdf4Q61112 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdf4Q61112 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sdf4Q61112 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdf4Q61112 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdf4Q61112 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sdf4Q61112 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.58■□□□□ 0.41
Sdf4Q61112 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Sdf4Q61112 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdf4Q61112 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdf4Q61112 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.58■□□□□ 0.4
Sdf4Q61112 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Sdf4Q61112 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdf4Q61112 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdf4Q61112 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.58■□□□□ 0.4
Sdf4Q61112 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms