Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxf1Q61080 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Foxf1Q61080 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxf1Q61080 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxf1Q61080 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.54□□□□□ -0.08
Foxf1Q61080 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.54□□□□□ -0.08
Foxf1Q61080 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxf1Q61080 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Foxf1Q61080 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxf1Q61080 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.53□□□□□ -0.08
Foxf1Q61080 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Foxf1Q61080 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.53□□□□□ -0.08
Foxf1Q61080 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.53□□□□□ -0.08
Foxf1Q61080 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.53□□□□□ -0.08
Foxf1Q61080 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxf1Q61080 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.53□□□□□ -0.08
Foxf1Q61080 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Foxf1Q61080 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxf1Q61080 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxf1Q61080 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.52□□□□□ -0.08
Foxf1Q61080 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Foxf1Q61080 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.52□□□□□ -0.08
Foxf1Q61080 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxf1Q61080 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.52□□□□□ -0.08
Foxf1Q61080 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxf1Q61080 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.52□□□□□ -0.08
Foxf1Q61080 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxf1Q61080 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.52□□□□□ -0.08
Foxf1Q61080 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Foxf1Q61080 Gm10653-202ENSMUST00000139570 835 ntBASIC14.52□□□□□ -0.09
Foxf1Q61080 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.52□□□□□ -0.09
Foxf1Q61080 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.52□□□□□ -0.09
Foxf1Q61080 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxf1Q61080 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.52□□□□□ -0.09
Foxf1Q61080 Gm18025-201ENSMUST00000221733 862 ntBASIC14.52□□□□□ -0.09
Foxf1Q61080 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Foxf1Q61080 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxf1Q61080 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Foxf1Q61080 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxf1Q61080 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxf1Q61080 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxf1Q61080 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.52□□□□□ -0.09
Foxf1Q61080 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxf1Q61080 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.51□□□□□ -0.09
Foxf1Q61080 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Foxf1Q61080 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.51□□□□□ -0.09
Foxf1Q61080 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.51□□□□□ -0.09
Foxf1Q61080 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.51□□□□□ -0.09
Foxf1Q61080 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.51□□□□□ -0.09
Foxf1Q61080 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.51□□□□□ -0.09
Foxf1Q61080 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.51□□□□□ -0.09
Foxf1Q61080 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Foxf1Q61080 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.51□□□□□ -0.09
Foxf1Q61080 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxf1Q61080 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Foxf1Q61080 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxf1Q61080 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxf1Q61080 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxf1Q61080 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Foxf1Q61080 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxf1Q61080 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Foxf1Q61080 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.49□□□□□ -0.09
Foxf1Q61080 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms