Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sim1Q61045 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Mir2861-201ENSMUST00000175539 82 ntBASIC17.22■□□□□ 0.35
Sim1Q61045 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.22■□□□□ 0.35
Sim1Q61045 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sim1Q61045 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sim1Q61045 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.22■□□□□ 0.35
Sim1Q61045 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sim1Q61045 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sim1Q61045 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sim1Q61045 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Sim1Q61045 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sim1Q61045 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sim1Q61045 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sim1Q61045 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.2■□□□□ 0.34
Sim1Q61045 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.2■□□□□ 0.34
Sim1Q61045 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.2■□□□□ 0.34
Sim1Q61045 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sim1Q61045 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.2■□□□□ 0.34
Sim1Q61045 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.2■□□□□ 0.34
Sim1Q61045 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Sim1Q61045 Mir6349-201ENSMUST00000184059 97 ntBASIC17.2■□□□□ 0.34
Sim1Q61045 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.2■□□□□ 0.34
Sim1Q61045 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.2■□□□□ 0.34
Sim1Q61045 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sim1Q61045 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Sim1Q61045 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sim1Q61045 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.19■□□□□ 0.34
Sim1Q61045 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.19■□□□□ 0.34
Sim1Q61045 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.19■□□□□ 0.34
Sim1Q61045 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.19■□□□□ 0.34
Sim1Q61045 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.19■□□□□ 0.34
Sim1Q61045 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sim1Q61045 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sim1Q61045 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Idnk-204ENSMUST00000226010 1898 ntBASIC17.18■□□□□ 0.34
Sim1Q61045 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sim1Q61045 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Gm7284-201ENSMUST00000131667 944 ntBASIC17.18■□□□□ 0.34
Sim1Q61045 Gm22697-201ENSMUST00000175194 63 ntBASIC17.18■□□□□ 0.34
Sim1Q61045 Gm2274-201ENSMUST00000184539 609 ntBASIC17.18■□□□□ 0.34
Sim1Q61045 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sim1Q61045 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Gm7461-201ENSMUST00000058918 827 ntBASIC17.18■□□□□ 0.34
Sim1Q61045 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sim1Q61045 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms