Protein–RNA interactions for Protein: Q61043

Nin, Ninein, mousemouse

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NinQ61043 Gm44454-201ENSMUST00000198541 138 ntBASIC20.11■□□□□ 0.81
NinQ61043 Gm44314-201ENSMUST00000199263 138 ntBASIC20.11■□□□□ 0.81
NinQ61043 Gm44394-201ENSMUST00000199558 138 ntBASIC20.11■□□□□ 0.81
NinQ61043 Gm44484-201ENSMUST00000199873 138 ntBASIC20.11■□□□□ 0.81
NinQ61043 Gm44466-201ENSMUST00000200264 138 ntBASIC20.11■□□□□ 0.81
NinQ61043 Gm44359-201ENSMUST00000200671 138 ntBASIC20.11■□□□□ 0.81
NinQ61043 Gm7729-201ENSMUST00000050143 801 ntBASIC20.11■□□□□ 0.81
NinQ61043 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NinQ61043 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NinQ61043 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NinQ61043 Phf7-203ENSMUST00000226565 1971 ntBASIC20.11■□□□□ 0.81
NinQ61043 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NinQ61043 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
NinQ61043 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NinQ61043 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NinQ61043 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.1■□□□□ 0.81
NinQ61043 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.1■□□□□ 0.81
NinQ61043 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.1■□□□□ 0.81
NinQ61043 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
NinQ61043 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
NinQ61043 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.1■□□□□ 0.81
NinQ61043 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.1■□□□□ 0.81
NinQ61043 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NinQ61043 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NinQ61043 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NinQ61043 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.09■□□□□ 0.81
NinQ61043 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NinQ61043 Gm1401-201ENSMUST00000122048 772 ntBASIC20.09■□□□□ 0.81
NinQ61043 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.09■□□□□ 0.81
NinQ61043 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.09■□□□□ 0.81
NinQ61043 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NinQ61043 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.09■□□□□ 0.81
NinQ61043 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.09■□□□□ 0.81
NinQ61043 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.09■□□□□ 0.81
NinQ61043 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NinQ61043 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NinQ61043 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NinQ61043 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.08■□□□□ 0.81
NinQ61043 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NinQ61043 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NinQ61043 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NinQ61043 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.08■□□□□ 0.8
NinQ61043 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.08■□□□□ 0.8
NinQ61043 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.08■□□□□ 0.8
NinQ61043 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NinQ61043 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NinQ61043 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NinQ61043 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.07■□□□□ 0.8
NinQ61043 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NinQ61043 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NinQ61043 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.07■□□□□ 0.8
NinQ61043 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NinQ61043 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NinQ61043 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NinQ61043 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NinQ61043 Rprl3-201ENSMUST00000157400 290 ntBASIC20.07■□□□□ 0.8
NinQ61043 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.07■□□□□ 0.8
NinQ61043 Gm18421-201ENSMUST00000204122 625 ntBASIC20.07■□□□□ 0.8
NinQ61043 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NinQ61043 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NinQ61043 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NinQ61043 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NinQ61043 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NinQ61043 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.06■□□□□ 0.8
NinQ61043 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NinQ61043 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NinQ61043 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NinQ61043 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NinQ61043 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NinQ61043 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NinQ61043 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.05■□□□□ 0.8
NinQ61043 Gm13186-201ENSMUST00000118031 316 ntBASIC20.05■□□□□ 0.8
NinQ61043 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NinQ61043 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.05■□□□□ 0.8
NinQ61043 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NinQ61043 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NinQ61043 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NinQ61043 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms