Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col12a1Q60847 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col12a1Q60847 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col12a1Q60847 Gm6376-201ENSMUST00000209407 580 ntBASIC17.22■□□□□ 0.35
Col12a1Q60847 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col12a1Q60847 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col12a1Q60847 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col12a1Q60847 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col12a1Q60847 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.22■□□□□ 0.35
Col12a1Q60847 Gm2213-201ENSMUST00000197485 688 ntBASIC17.22■□□□□ 0.35
Col12a1Q60847 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col12a1Q60847 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col12a1Q60847 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col12a1Q60847 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col12a1Q60847 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Col12a1Q60847 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.21■□□□□ 0.35
Col12a1Q60847 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.21■□□□□ 0.35
Col12a1Q60847 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.21■□□□□ 0.35
Col12a1Q60847 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col12a1Q60847 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col12a1Q60847 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col12a1Q60847 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col12a1Q60847 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.2■□□□□ 0.34
Col12a1Q60847 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col12a1Q60847 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col12a1Q60847 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col12a1Q60847 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col12a1Q60847 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.19■□□□□ 0.34
Col12a1Q60847 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.19■□□□□ 0.34
Col12a1Q60847 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col12a1Q60847 Tgds-204ENSMUST00000228543 1594 ntBASIC17.19■□□□□ 0.34
Col12a1Q60847 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col12a1Q60847 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.19■□□□□ 0.34
Col12a1Q60847 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col12a1Q60847 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.18■□□□□ 0.34
Col12a1Q60847 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col12a1Q60847 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Col12a1Q60847 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col12a1Q60847 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col12a1Q60847 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col12a1Q60847 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.18■□□□□ 0.34
Col12a1Q60847 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col12a1Q60847 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col12a1Q60847 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.18■□□□□ 0.34
Col12a1Q60847 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.18■□□□□ 0.34
Col12a1Q60847 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col12a1Q60847 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col12a1Q60847 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col12a1Q60847 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Gm6296-201ENSMUST00000222599 943 ntBASIC17.17■□□□□ 0.34
Col12a1Q60847 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col12a1Q60847 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col12a1Q60847 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Gm14494-201ENSMUST00000118786 435 ntBASIC17.17■□□□□ 0.34
Col12a1Q60847 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col12a1Q60847 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.17■□□□□ 0.34
Col12a1Q60847 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.17■□□□□ 0.34
Col12a1Q60847 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col12a1Q60847 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col12a1Q60847 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col12a1Q60847 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col12a1Q60847 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col12a1Q60847 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col12a1Q60847 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col12a1Q60847 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.16■□□□□ 0.34
Col12a1Q60847 Gm8097-201ENSMUST00000117903 829 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms