Protein–RNA interactions for Protein: Q5YIR8

Clec4a4, C-type lectin domain family 4, member a4, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clec4a4Q5YIR8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.12■□□□□ 0.33
Clec4a4Q5YIR8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clec4a4Q5YIR8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clec4a4Q5YIR8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Mir5130-201ENSMUST00000175160 84 ntBASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clec4a4Q5YIR8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clec4a4Q5YIR8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clec4a4Q5YIR8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.08■□□□□ 0.33
Clec4a4Q5YIR8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.08■□□□□ 0.33
Clec4a4Q5YIR8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clec4a4Q5YIR8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clec4a4Q5YIR8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Gm45058-201ENSMUST00000205810 766 ntBASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Clec4a4Q5YIR8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clec4a4Q5YIR8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clec4a4Q5YIR8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms