Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Shroom1Q5SX79 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.45■□□□□ 0.54
Shroom1Q5SX79 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Shroom1Q5SX79 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Gm23634-201ENSMUST00000175071 91 ntBASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shroom1Q5SX79 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Gm24841-201ENSMUST00000158676 357 ntBASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shroom1Q5SX79 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Gm13401-201ENSMUST00000117074 291 ntBASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Gm21362-201ENSMUST00000194272 928 ntBASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Shroom1Q5SX79 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Gm16061-201ENSMUST00000122167 857 ntBASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Gm29791-202ENSMUST00000207888 369 ntBASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shroom1Q5SX79 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Shroom1Q5SX79 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Shroom1Q5SX79 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Shroom1Q5SX79 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.4■□□□□ 0.54
Shroom1Q5SX79 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.4■□□□□ 0.54
Shroom1Q5SX79 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Shroom1Q5SX79 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Shroom1Q5SX79 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.4■□□□□ 0.54
Shroom1Q5SX79 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms