Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Gm7638-201ENSMUST00000121348 967 ntBASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc88aQ5SNZ0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc88aQ5SNZ0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 AW822252-206ENSMUST00000208904 237 ntBASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc88aQ5SNZ0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm27357-201ENSMUST00000183754 135 ntBASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm7791-201ENSMUST00000219066 539 ntBASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm6443-201ENSMUST00000203599 874 ntBASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc88aQ5SNZ0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.93■□□□□ 0.78
Ccdc88aQ5SNZ0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc88aQ5SNZ0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc88aQ5SNZ0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc88aQ5SNZ0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc88aQ5SNZ0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc88aQ5SNZ0 Gm34391-201ENSMUST00000203706 907 ntBASIC19.91■□□□□ 0.78
Ccdc88aQ5SNZ0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc88aQ5SNZ0 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.91■□□□□ 0.78
Ccdc88aQ5SNZ0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc88aQ5SNZ0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc88aQ5SNZ0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc88aQ5SNZ0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc88aQ5SNZ0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Ccdc88aQ5SNZ0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms