Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav2Q5R1I9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Gm24841-201ENSMUST00000158676 357 ntBASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav2Q5R1I9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Gm7889-201ENSMUST00000185591 958 ntBASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav2Q5R1I9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav2Q5R1I9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav2Q5R1I9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Trav2Q5R1I9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Gm18959-201ENSMUST00000208954 655 ntBASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms