Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav3-1Q5R1I8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Trav3-1Q5R1I8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav3-1Q5R1I8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav3-1Q5R1I8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav3-1Q5R1I8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms