Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-1Q5R1H8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav8d-1Q5R1H8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Gm13534-201ENSMUST00000121169 513 ntBASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav8d-1Q5R1H8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav8d-1Q5R1H8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Haglr-201ENSMUST00000100000 2085 ntBASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav8d-1Q5R1H8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms