Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm29257-201ENSMUST00000186115 639 ntBASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav5d-4Q5R1F6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav5d-4Q5R1F6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.93□□□□□ -0.02
Trav5d-4Q5R1F6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Mir8112-201ENSMUST00000184382 131 ntBASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav5d-4Q5R1F6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Gm12527-201ENSMUST00000117967 564 ntBASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Gm11643-201ENSMUST00000119578 864 ntBASIC14.91□□□□□ -0.02
Trav5d-4Q5R1F6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms