Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf43Q5NCP0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf43Q5NCP0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf43Q5NCP0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Rnf43Q5NCP0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Rnf43Q5NCP0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf43Q5NCP0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Gm7153-201ENSMUST00000117092 455 ntBASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf43Q5NCP0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Gm11950-201ENSMUST00000121615 838 ntBASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Gm27357-201ENSMUST00000183754 135 ntBASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf43Q5NCP0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf43Q5NCP0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms