Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Gm43438-201ENSMUST00000198133 379 ntBASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Gm7213-201ENSMUST00000215977 950 ntBASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim41Q5NCC3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trim41Q5NCC3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Trim41Q5NCC3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trim41Q5NCC3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Trim41Q5NCC3 Mir8098-201ENSMUST00000184011 137 ntBASIC30.12■■■□□ 2.41
Trim41Q5NCC3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC30.12■■■□□ 2.41
Trim41Q5NCC3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trim41Q5NCC3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Trim41Q5NCC3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Trim41Q5NCC3 Gm5112-201ENSMUST00000204407 2368 ntBASIC30.11■■■□□ 2.41
Trim41Q5NCC3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
Trim41Q5NCC3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC30.11■■■□□ 2.41
Trim41Q5NCC3 Gm10576-201ENSMUST00000191927 825 ntBASIC30.11■■■□□ 2.41
Trim41Q5NCC3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Trim41Q5NCC3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trim41Q5NCC3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Gm43272-201ENSMUST00000200599 1584 ntBASIC30.1■■■□□ 2.41
Trim41Q5NCC3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim41Q5NCC3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim41Q5NCC3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC30.08■■■□□ 2.41
Trim41Q5NCC3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Gm9013-201ENSMUST00000132939 882 ntBASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Trim41Q5NCC3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC30.06■■■□□ 2.4
Trim41Q5NCC3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Trim41Q5NCC3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC30.06■■■□□ 2.4
Trim41Q5NCC3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC30.06■■■□□ 2.4
Trim41Q5NCC3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Trim41Q5NCC3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Trim41Q5NCC3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
Trim41Q5NCC3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim41Q5NCC3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim41Q5NCC3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim41Q5NCC3 Otx2os1-206ENSMUST00000228153 787 ntBASIC30.05■■■□□ 2.4
Trim41Q5NCC3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim41Q5NCC3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim41Q5NCC3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim41Q5NCC3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Trim41Q5NCC3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim41Q5NCC3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Trim41Q5NCC3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Trim41Q5NCC3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Trim41Q5NCC3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC30.04■■■□□ 2.4
Trim41Q5NCC3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC30.04■■■□□ 2.4
Trim41Q5NCC3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC30.04■■■□□ 2.4
Trim41Q5NCC3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Trim41Q5NCC3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Trim41Q5NCC3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms