Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 AV026068-213ENSMUST00000223675 1171 ntBASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.39□□□□□ -0.75
Herc2Q4U2R1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Gm13036-201ENSMUST00000117799 748 ntBASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.39□□□□□ -0.75
Herc2Q4U2R1 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc2Q4U2R1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc2Q4U2R1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Gm6550-201ENSMUST00000187574 993 ntBASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Gm15590-201ENSMUST00000078419 552 ntBASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Gm27437-201ENSMUST00000183429 107 ntBASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.37□□□□□ -0.75
Herc2Q4U2R1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Gm37025-201ENSMUST00000195159 829 ntBASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Herc2Q4U2R1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Herc2Q4U2R1 Gm32051-202ENSMUST00000197905 2385 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms