Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Il3ra-202ENSMUST00000223589 738 ntBASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ckap2Q3V1H1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ckap2Q3V1H1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.9■□□□□ 0.78
Ckap2Q3V1H1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ckap2Q3V1H1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ckap2Q3V1H1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ckap2Q3V1H1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap2Q3V1H1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap2Q3V1H1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.87■□□□□ 0.77
Ckap2Q3V1H1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms