Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.94■□□□□ 0.46
Trim80Q3V061 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim80Q3V061 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim80Q3V061 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim80Q3V061 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Trim80Q3V061 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.93■□□□□ 0.46
Trim80Q3V061 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim80Q3V061 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim80Q3V061 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim80Q3V061 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim80Q3V061 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim80Q3V061 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim80Q3V061 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim80Q3V061 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trim80Q3V061 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim80Q3V061 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim80Q3V061 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim80Q3V061 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim80Q3V061 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim80Q3V061 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim80Q3V061 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim80Q3V061 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.92■□□□□ 0.46
Trim80Q3V061 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim80Q3V061 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim80Q3V061 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Gm13534-201ENSMUST00000121169 513 ntBASIC17.91■□□□□ 0.46
Trim80Q3V061 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim80Q3V061 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Trim80Q3V061 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim80Q3V061 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim80Q3V061 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim80Q3V061 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim80Q3V061 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim80Q3V061 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.9■□□□□ 0.46
Trim80Q3V061 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim80Q3V061 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.9■□□□□ 0.46
Trim80Q3V061 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim80Q3V061 Gm6211-202ENSMUST00000167849 925 ntBASIC17.9■□□□□ 0.46
Trim80Q3V061 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim80Q3V061 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.9■□□□□ 0.46
Trim80Q3V061 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Gm20049-201ENSMUST00000219950 730 ntBASIC17.9■□□□□ 0.46
Trim80Q3V061 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.9■□□□□ 0.46
Trim80Q3V061 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim80Q3V061 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trim80Q3V061 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
Trim80Q3V061 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim80Q3V061 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim80Q3V061 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim80Q3V061 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim80Q3V061 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms