Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp30Q3UN04 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Gm10819-201ENSMUST00000099988 561 ntBASIC17.45■□□□□ 0.38
Usp30Q3UN04 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp30Q3UN04 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Gm7213-201ENSMUST00000215977 950 ntBASIC17.44■□□□□ 0.38
Usp30Q3UN04 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.44■□□□□ 0.38
Usp30Q3UN04 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp30Q3UN04 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.44■□□□□ 0.38
Usp30Q3UN04 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Usp30Q3UN04 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.44■□□□□ 0.38
Usp30Q3UN04 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp30Q3UN04 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp30Q3UN04 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.42■□□□□ 0.38
Usp30Q3UN04 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.42■□□□□ 0.38
Usp30Q3UN04 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Usp30Q3UN04 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Gm9013-201ENSMUST00000132939 882 ntBASIC17.41■□□□□ 0.38
Usp30Q3UN04 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Gm5587-201ENSMUST00000206270 674 ntBASIC17.41■□□□□ 0.38
Usp30Q3UN04 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Usp30Q3UN04 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp30Q3UN04 Fst-202ENSMUST00000223640 2612 ntBASIC17.4■□□□□ 0.38
Usp30Q3UN04 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms