Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Gm7230-201ENSMUST00000173026 815 ntBASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Spg11Q3UHA3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Spg11Q3UHA3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Spg11Q3UHA3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Spg11Q3UHA3 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.02■□□□□ 0.16
Spg11Q3UHA3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Spg11Q3UHA3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Spg11Q3UHA3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Spg11Q3UHA3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Spg11Q3UHA3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Spg11Q3UHA3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Mir3113-201ENSMUST00000175478 76 ntBASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Spg11Q3UHA3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.01■□□□□ 0.15
Spg11Q3UHA3 AA543401-201ENSMUST00000164248 1269 ntBASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.01■□□□□ 0.15
Spg11Q3UHA3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16■□□□□ 0.15
Spg11Q3UHA3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Gm13036-201ENSMUST00000117799 748 ntBASIC16■□□□□ 0.15
Spg11Q3UHA3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Gm15173-201ENSMUST00000122049 433 ntBASIC16■□□□□ 0.15
Spg11Q3UHA3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16■□□□□ 0.15
Spg11Q3UHA3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Spg11Q3UHA3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16■□□□□ 0.15
Spg11Q3UHA3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Spg11Q3UHA3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Spg11Q3UHA3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16■□□□□ 0.15
Spg11Q3UHA3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Spg11Q3UHA3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 146.9 ms