Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Carmil3Q3UFQ8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Gm11355-201ENSMUST00000121120 306 ntBASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Carmil3Q3UFQ8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Gm17807-201ENSMUST00000186869 298 ntBASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.92■□□□□ 0.94
Carmil3Q3UFQ8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Carmil3Q3UFQ8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Carmil3Q3UFQ8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Gm28033-201ENSMUST00000184224 96 ntBASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Carmil3Q3UFQ8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Gm11950-201ENSMUST00000121615 838 ntBASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.88■□□□□ 0.93
Carmil3Q3UFQ8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Gm18669-201ENSMUST00000216049 778 ntBASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Carmil3Q3UFQ8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms