Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vars2Q3U2A8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vars2Q3U2A8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Psmb5-202ENSMUST00000227257 622 ntBASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vars2Q3U2A8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vars2Q3U2A8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Gm10576-201ENSMUST00000191927 825 ntBASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Gm42670-201ENSMUST00000201816 1292 ntBASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.6■■□□□ 1.05
Vars2Q3U2A8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.6■■□□□ 1.05
Vars2Q3U2A8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.6■■□□□ 1.05
Vars2Q3U2A8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Gm27867-201ENSMUST00000184778 125 ntBASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vars2Q3U2A8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vars2Q3U2A8 Gm13186-201ENSMUST00000118031 316 ntBASIC21.58■■□□□ 1.05
Vars2Q3U2A8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC21.58■■□□□ 1.05
Vars2Q3U2A8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vars2Q3U2A8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vars2Q3U2A8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vars2Q3U2A8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vars2Q3U2A8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vars2Q3U2A8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vars2Q3U2A8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vars2Q3U2A8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Vars2Q3U2A8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Vars2Q3U2A8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vars2Q3U2A8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.57■■□□□ 1.04
Vars2Q3U2A8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vars2Q3U2A8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Vars2Q3U2A8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vars2Q3U2A8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vars2Q3U2A8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms