Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Gm27011-201ENSMUST00000182352 972 ntBASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.06■□□□□ 0.8
Ctdnep1Q3TP92 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ctdnep1Q3TP92 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ctdnep1Q3TP92 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.05■□□□□ 0.8
Ctdnep1Q3TP92 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctdnep1Q3TP92 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ctdnep1Q3TP92 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.05■□□□□ 0.8
Ctdnep1Q3TP92 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ctdnep1Q3TP92 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctdnep1Q3TP92 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Ctdnep1Q3TP92 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctdnep1Q3TP92 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.01■□□□□ 0.79
Ctdnep1Q3TP92 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 AC153881.1-201ENSMUST00000214448 284 ntBASIC20■□□□□ 0.79
Ctdnep1Q3TP92 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Gm7712-202ENSMUST00000222331 1510 ntBASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ctdnep1Q3TP92 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ctdnep1Q3TP92 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms