Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nhej1Q3KNJ2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Gm11927-201ENSMUST00000118472 759 ntBASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Gm18284-201ENSMUST00000172604 624 ntBASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nhej1Q3KNJ2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Gm42569-201ENSMUST00000200539 472 ntBASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nhej1Q3KNJ2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nhej1Q3KNJ2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Nhej1Q3KNJ2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nhej1Q3KNJ2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nhej1Q3KNJ2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Gm13401-201ENSMUST00000117074 291 ntBASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Gm13148-201ENSMUST00000118892 745 ntBASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nhej1Q3KNJ2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nhej1Q3KNJ2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.49■□□□□ 0.55
Nhej1Q3KNJ2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nhej1Q3KNJ2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms