Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chrna5Q2MKA5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.67■□□□□ 0.9
Chrna5Q2MKA5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chrna5Q2MKA5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna5Q2MKA5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chrna5Q2MKA5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Chrna5Q2MKA5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Mir8098-201ENSMUST00000184011 137 ntBASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna5Q2MKA5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Grk6-206ENSMUST00000224995 2971 ntBASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Gm12895-201ENSMUST00000122214 226 ntBASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Gm43347-201ENSMUST00000200226 580 ntBASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chrna5Q2MKA5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Gm11452-201ENSMUST00000122376 690 ntBASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Mir8112-201ENSMUST00000184382 131 ntBASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.62■□□□□ 0.89
Chrna5Q2MKA5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms