Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf1Q07802 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ebf1Q07802 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ebf1Q07802 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ebf1Q07802 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ebf1Q07802 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.55■□□□□ 0.4
Ebf1Q07802 Gm16061-201ENSMUST00000122167 857 ntBASIC17.55■□□□□ 0.4
Ebf1Q07802 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.55■□□□□ 0.4
Ebf1Q07802 Ank2-226ENSMUST00000189368 339 ntBASIC17.55■□□□□ 0.4
Ebf1Q07802 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.55■□□□□ 0.4
Ebf1Q07802 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.55■□□□□ 0.4
Ebf1Q07802 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.55■□□□□ 0.4
Ebf1Q07802 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf1Q07802 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.54■□□□□ 0.4
Ebf1Q07802 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.54■□□□□ 0.4
Ebf1Q07802 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ebf1Q07802 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.54■□□□□ 0.4
Ebf1Q07802 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.54■□□□□ 0.4
Ebf1Q07802 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.54■□□□□ 0.4
Ebf1Q07802 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf1Q07802 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ebf1Q07802 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ebf1Q07802 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ebf1Q07802 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ebf1Q07802 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.53■□□□□ 0.4
Ebf1Q07802 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf1Q07802 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.52■□□□□ 0.4
Ebf1Q07802 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf1Q07802 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf1Q07802 Gm13474-201ENSMUST00000122466 815 ntBASIC17.52■□□□□ 0.4
Ebf1Q07802 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
Ebf1Q07802 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.52■□□□□ 0.4
Ebf1Q07802 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.52■□□□□ 0.4
Ebf1Q07802 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf1Q07802 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf1Q07802 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ebf1Q07802 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ebf1Q07802 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ebf1Q07802 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.52■□□□□ 0.39
Ebf1Q07802 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ebf1Q07802 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ebf1Q07802 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.51■□□□□ 0.39
Ebf1Q07802 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.51■□□□□ 0.39
Ebf1Q07802 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.51■□□□□ 0.39
Ebf1Q07802 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.51■□□□□ 0.39
Ebf1Q07802 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.51■□□□□ 0.39
Ebf1Q07802 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ebf1Q07802 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms