Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.83□□□□□ -0.36
Hspg2Q05793 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.82□□□□□ -0.36
Hspg2Q05793 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.82□□□□□ -0.36
Hspg2Q05793 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.82□□□□□ -0.36
Hspg2Q05793 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.82□□□□□ -0.36
Hspg2Q05793 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.82□□□□□ -0.36
Hspg2Q05793 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.82□□□□□ -0.36
Hspg2Q05793 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Gm43575-201ENSMUST00000196420 516 ntBASIC12.82□□□□□ -0.36
Hspg2Q05793 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hspg2Q05793 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.82□□□□□ -0.36
Hspg2Q05793 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hspg2Q05793 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.81□□□□□ -0.36
Hspg2Q05793 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hspg2Q05793 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hspg2Q05793 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.81□□□□□ -0.36
Hspg2Q05793 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hspg2Q05793 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.81□□□□□ -0.36
Hspg2Q05793 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.81□□□□□ -0.36
Hspg2Q05793 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Hspg2Q05793 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.81□□□□□ -0.36
Hspg2Q05793 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hspg2Q05793 Gm11452-201ENSMUST00000122376 690 ntBASIC12.8□□□□□ -0.36
Hspg2Q05793 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Hspg2Q05793 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hspg2Q05793 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hspg2Q05793 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.8□□□□□ -0.36
Hspg2Q05793 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.8□□□□□ -0.36
Hspg2Q05793 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.8□□□□□ -0.36
Hspg2Q05793 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hspg2Q05793 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.79□□□□□ -0.36
Hspg2Q05793 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.79□□□□□ -0.36
Hspg2Q05793 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.79□□□□□ -0.36
Hspg2Q05793 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.79□□□□□ -0.36
Hspg2Q05793 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hspg2Q05793 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hspg2Q05793 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.78□□□□□ -0.36
Hspg2Q05793 Gm10060-201ENSMUST00000212002 111 ntBASIC12.78□□□□□ -0.36
Hspg2Q05793 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.78□□□□□ -0.36
Hspg2Q05793 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hspg2Q05793 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hspg2Q05793 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Gm10418-201ENSMUST00000100943 576 ntBASIC12.78□□□□□ -0.36
Hspg2Q05793 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hspg2Q05793 Gm37722-201ENSMUST00000193757 208 ntBASIC12.78□□□□□ -0.36
Hspg2Q05793 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.78□□□□□ -0.36
Hspg2Q05793 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Rps4l-201ENSMUST00000071745 943 ntBASIC12.78□□□□□ -0.36
Hspg2Q05793 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hspg2Q05793 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms