Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps45P97390 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.95■□□□□ 0.46
Vps45P97390 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps45P97390 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Vps45P97390 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vps45P97390 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps45P97390 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps45P97390 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps45P97390 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vps45P97390 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Vps45P97390 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps45P97390 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps45P97390 Gm6659-201ENSMUST00000174752 547 ntBASIC17.94■□□□□ 0.46
Vps45P97390 Gm37292-201ENSMUST00000192062 758 ntBASIC17.94■□□□□ 0.46
Vps45P97390 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.94■□□□□ 0.46
Vps45P97390 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.94■□□□□ 0.46
Vps45P97390 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps45P97390 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Vps45P97390 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps45P97390 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vps45P97390 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vps45P97390 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 Gm8969-201ENSMUST00000199694 526 ntBASIC17.93■□□□□ 0.46
Vps45P97390 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps45P97390 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps45P97390 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Vps45P97390 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps45P97390 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps45P97390 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Vps45P97390 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.92■□□□□ 0.46
Vps45P97390 Gm43183-201ENSMUST00000200632 547 ntBASIC17.92■□□□□ 0.46
Vps45P97390 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.92■□□□□ 0.46
Vps45P97390 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.92■□□□□ 0.46
Vps45P97390 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps45P97390 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.91■□□□□ 0.46
Vps45P97390 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vps45P97390 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.91■□□□□ 0.46
Vps45P97390 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Vps45P97390 Gm13559-201ENSMUST00000120476 863 ntBASIC17.91■□□□□ 0.46
Vps45P97390 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vps45P97390 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.91■□□□□ 0.46
Vps45P97390 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Vps45P97390 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps45P97390 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.91■□□□□ 0.46
Vps45P97390 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Vps45P97390 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps45P97390 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vps45P97390 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps45P97390 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Vps45P97390 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.9■□□□□ 0.46
Vps45P97390 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.9■□□□□ 0.46
Vps45P97390 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps45P97390 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps45P97390 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps45P97390 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vps45P97390 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps45P97390 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.9■□□□□ 0.46
Vps45P97390 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps45P97390 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps45P97390 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps45P97390 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps45P97390 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps45P97390 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps45P97390 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.89■□□□□ 0.45
Vps45P97390 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps45P97390 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps45P97390 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps45P97390 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps45P97390 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.89■□□□□ 0.45
Vps45P97390 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.89■□□□□ 0.45
Vps45P97390 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms