Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim43cP86449 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Trim43cP86449 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim43cP86449 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim43cP86449 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.88■□□□□ 0.61
Trim43cP86449 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Trim43cP86449 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43cP86449 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trim43cP86449 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim43cP86449 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.87■□□□□ 0.61
Trim43cP86449 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Trim43cP86449 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trim43cP86449 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43cP86449 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Trim43cP86449 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.86■□□□□ 0.61
Trim43cP86449 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim43cP86449 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43cP86449 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim43cP86449 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim43cP86449 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim43cP86449 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim43cP86449 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.85■□□□□ 0.61
Trim43cP86449 Gm21814-202ENSMUST00000203277 873 ntBASIC18.85■□□□□ 0.61
Trim43cP86449 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim43cP86449 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim43cP86449 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Trim43cP86449 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim43cP86449 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43cP86449 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim43cP86449 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim43cP86449 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43cP86449 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43cP86449 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim43cP86449 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43cP86449 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim43cP86449 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43cP86449 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43cP86449 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43cP86449 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43cP86449 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43cP86449 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.83■□□□□ 0.61
Trim43cP86449 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.83■□□□□ 0.61
Trim43cP86449 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43cP86449 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43cP86449 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.83■□□□□ 0.6
Trim43cP86449 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43cP86449 Gm38027-201ENSMUST00000192315 235 ntBASIC18.83■□□□□ 0.6
Trim43cP86449 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
Trim43cP86449 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43cP86449 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43cP86449 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43cP86449 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim43cP86449 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43cP86449 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43cP86449 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim43cP86449 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43cP86449 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43cP86449 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43cP86449 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.82■□□□□ 0.6
Trim43cP86449 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim43cP86449 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms