Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CiitaP79621 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CiitaP79621 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.84■□□□□ 0.61
CiitaP79621 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CiitaP79621 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CiitaP79621 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CiitaP79621 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CiitaP79621 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CiitaP79621 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
CiitaP79621 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CiitaP79621 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CiitaP79621 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CiitaP79621 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CiitaP79621 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CiitaP79621 Gm16061-201ENSMUST00000122167 857 ntBASIC18.83■□□□□ 0.6
CiitaP79621 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CiitaP79621 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.83■□□□□ 0.6
CiitaP79621 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.83■□□□□ 0.6
CiitaP79621 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CiitaP79621 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CiitaP79621 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CiitaP79621 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CiitaP79621 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CiitaP79621 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CiitaP79621 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CiitaP79621 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CiitaP79621 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CiitaP79621 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CiitaP79621 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CiitaP79621 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CiitaP79621 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CiitaP79621 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CiitaP79621 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CiitaP79621 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CiitaP79621 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CiitaP79621 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
CiitaP79621 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.81■□□□□ 0.6
CiitaP79621 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CiitaP79621 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.81■□□□□ 0.6
CiitaP79621 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.81■□□□□ 0.6
CiitaP79621 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CiitaP79621 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CiitaP79621 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CiitaP79621 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CiitaP79621 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CiitaP79621 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CiitaP79621 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CiitaP79621 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CiitaP79621 Gm13474-201ENSMUST00000122466 815 ntBASIC18.8■□□□□ 0.6
CiitaP79621 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CiitaP79621 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CiitaP79621 Gm6659-201ENSMUST00000174752 547 ntBASIC18.8■□□□□ 0.6
CiitaP79621 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.8■□□□□ 0.6
CiitaP79621 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CiitaP79621 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CiitaP79621 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CiitaP79621 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.79■□□□□ 0.6
CiitaP79621 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.79■□□□□ 0.6
CiitaP79621 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CiitaP79621 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CiitaP79621 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CiitaP79621 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
CiitaP79621 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CiitaP79621 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.78■□□□□ 0.6
CiitaP79621 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CiitaP79621 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CiitaP79621 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CiitaP79621 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.78■□□□□ 0.6
CiitaP79621 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CiitaP79621 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms