Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rad50P70388 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rad50P70388 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rad50P70388 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rad50P70388 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rad50P70388 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.86■□□□□ 0.93
Rad50P70388 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rad50P70388 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rad50P70388 Gm5417-201ENSMUST00000079706 384 ntBASIC20.86■□□□□ 0.93
Rad50P70388 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rad50P70388 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rad50P70388 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.85■□□□□ 0.93
Rad50P70388 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rad50P70388 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rad50P70388 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rad50P70388 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rad50P70388 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rad50P70388 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rad50P70388 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.84■□□□□ 0.93
Rad50P70388 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rad50P70388 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.84■□□□□ 0.93
Rad50P70388 Gm42545-201ENSMUST00000202755 922 ntBASIC20.84■□□□□ 0.93
Rad50P70388 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.84■□□□□ 0.93
Rad50P70388 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rad50P70388 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rad50P70388 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.84■□□□□ 0.93
Rad50P70388 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rad50P70388 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rad50P70388 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Rad50P70388 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rad50P70388 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.84■□□□□ 0.93
Rad50P70388 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.83■□□□□ 0.93
Rad50P70388 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rad50P70388 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rad50P70388 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rad50P70388 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rad50P70388 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Rad50P70388 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rad50P70388 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rad50P70388 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rad50P70388 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.83■□□□□ 0.92
Rad50P70388 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.82■□□□□ 0.92
Rad50P70388 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Rad50P70388 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.82■□□□□ 0.92
Rad50P70388 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rad50P70388 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.81■□□□□ 0.92
Rad50P70388 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.81■□□□□ 0.92
Rad50P70388 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.81■□□□□ 0.92
Rad50P70388 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rad50P70388 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rad50P70388 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rad50P70388 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Rad50P70388 Gm37292-201ENSMUST00000192062 758 ntBASIC20.8■□□□□ 0.92
Rad50P70388 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.8■□□□□ 0.92
Rad50P70388 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rad50P70388 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rad50P70388 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Rad50P70388 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.79■□□□□ 0.92
Rad50P70388 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rad50P70388 Gm9987-201ENSMUST00000069768 567 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms