Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.1■□□□□ 0.65
Hmgb1P63158 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Hmgb1P63158 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hmgb1P63158 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hmgb1P63158 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hmgb1P63158 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hmgb1P63158 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hmgb1P63158 Gm12896-201ENSMUST00000118430 226 ntBASIC19.09■□□□□ 0.65
Hmgb1P63158 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.09■□□□□ 0.65
Hmgb1P63158 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hmgb1P63158 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hmgb1P63158 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hmgb1P63158 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmgb1P63158 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Hmgb1P63158 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmgb1P63158 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hmgb1P63158 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Hmgb1P63158 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb1P63158 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.08■□□□□ 0.64
Hmgb1P63158 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.08■□□□□ 0.64
Hmgb1P63158 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Hmgb1P63158 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.08■□□□□ 0.64
Hmgb1P63158 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.08■□□□□ 0.64
Hmgb1P63158 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb1P63158 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.08■□□□□ 0.64
Hmgb1P63158 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.08■□□□□ 0.64
Hmgb1P63158 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb1P63158 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb1P63158 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb1P63158 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.08■□□□□ 0.64
Hmgb1P63158 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgb1P63158 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.07■□□□□ 0.64
Hmgb1P63158 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Hmgb1P63158 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.07■□□□□ 0.64
Hmgb1P63158 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hmgb1P63158 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.07■□□□□ 0.64
Hmgb1P63158 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb1P63158 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb1P63158 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.06■□□□□ 0.64
Hmgb1P63158 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Hmgb1P63158 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Hmgb1P63158 Gm11249-201ENSMUST00000117071 859 ntBASIC19.06■□□□□ 0.64
Hmgb1P63158 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb1P63158 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb1P63158 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb1P63158 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb1P63158 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb1P63158 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb1P63158 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Hmgb1P63158 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Hmgb1P63158 Gm6576-201ENSMUST00000169678 883 ntBASIC19.05■□□□□ 0.64
Hmgb1P63158 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.05■□□□□ 0.64
Hmgb1P63158 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Hmgb1P63158 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb1P63158 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms