Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Crnkl1P63154 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Crnkl1P63154 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Crnkl1P63154 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.19■□□□□ 0.34
Crnkl1P63154 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Crnkl1P63154 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.19■□□□□ 0.34
Crnkl1P63154 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Crnkl1P63154 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Crnkl1P63154 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Crnkl1P63154 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Crnkl1P63154 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Crnkl1P63154 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Crnkl1P63154 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Crnkl1P63154 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Crnkl1P63154 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Crnkl1P63154 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.18■□□□□ 0.34
Crnkl1P63154 Gm10033-202ENSMUST00000211874 928 ntBASIC17.18■□□□□ 0.34
Crnkl1P63154 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Crnkl1P63154 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Crnkl1P63154 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Crnkl1P63154 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.17■□□□□ 0.34
Crnkl1P63154 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.17■□□□□ 0.34
Crnkl1P63154 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Crnkl1P63154 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Crnkl1P63154 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.17■□□□□ 0.34
Crnkl1P63154 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.17■□□□□ 0.34
Crnkl1P63154 AV356131-201ENSMUST00000206201 750 ntBASIC17.17■□□□□ 0.34
Crnkl1P63154 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Crnkl1P63154 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Crnkl1P63154 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Crnkl1P63154 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.16■□□□□ 0.34
Crnkl1P63154 Gm13216-201ENSMUST00000117145 591 ntBASIC17.16■□□□□ 0.34
Crnkl1P63154 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.16■□□□□ 0.34
Crnkl1P63154 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.16■□□□□ 0.34
Crnkl1P63154 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.16■□□□□ 0.34
Crnkl1P63154 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Crnkl1P63154 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.16■□□□□ 0.34
Crnkl1P63154 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Crnkl1P63154 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms