Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 Gm17661-201ENSMUST00000170317 270 ntBASIC17.09■□□□□ 0.33
Lhx1P63006 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.09■□□□□ 0.33
Lhx1P63006 Il3ra-202ENSMUST00000223589 738 ntBASIC17.09■□□□□ 0.33
Lhx1P63006 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.09■□□□□ 0.33
Lhx1P63006 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx1P63006 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx1P63006 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx1P63006 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx1P63006 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lhx1P63006 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Lhx1P63006 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 Gm8969-201ENSMUST00000199694 526 ntBASIC17.08■□□□□ 0.32
Lhx1P63006 Gm7791-201ENSMUST00000219066 539 ntBASIC17.08■□□□□ 0.32
Lhx1P63006 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.08■□□□□ 0.32
Lhx1P63006 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Lhx1P63006 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lhx1P63006 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.07■□□□□ 0.32
Lhx1P63006 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.07■□□□□ 0.32
Lhx1P63006 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lhx1P63006 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.07■□□□□ 0.32
Lhx1P63006 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.07■□□□□ 0.32
Lhx1P63006 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Lhx1P63006 Gm18959-201ENSMUST00000208954 655 ntBASIC17.07■□□□□ 0.32
Lhx1P63006 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lhx1P63006 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Lhx1P63006 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.06■□□□□ 0.32
Lhx1P63006 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Lhx1P63006 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lhx1P63006 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Lhx1P63006 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lhx1P63006 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.05■□□□□ 0.32
Lhx1P63006 Gm10231-201ENSMUST00000181584 441 ntBASIC17.05■□□□□ 0.32
Lhx1P63006 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lhx1P63006 Gm10175-202ENSMUST00000208752 441 ntBASIC17.05■□□□□ 0.32
Lhx1P63006 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
Lhx1P63006 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lhx1P63006 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Lhx1P63006 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.04■□□□□ 0.32
Lhx1P63006 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lhx1P63006 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Lhx1P63006 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.04■□□□□ 0.32
Lhx1P63006 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lhx1P63006 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.04■□□□□ 0.32
Lhx1P63006 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Gm45058-201ENSMUST00000205810 766 ntBASIC17.04■□□□□ 0.32
Lhx1P63006 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms