Protein–RNA interactions for Protein: P62915

Gtf2b, Transcription initiation factor IIB, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2bP62915 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Gtf2bP62915 Gm15565-201ENSMUST00000118890 427 ntBASIC18.76■□□□□ 0.59
Gtf2bP62915 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.76■□□□□ 0.59
Gtf2bP62915 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gtf2bP62915 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Gtf2bP62915 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.75■□□□□ 0.59
Gtf2bP62915 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Gtf2bP62915 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.75■□□□□ 0.59
Gtf2bP62915 Gm11539-201ENSMUST00000119837 557 ntBASIC18.75■□□□□ 0.59
Gtf2bP62915 Gm13436-201ENSMUST00000120418 567 ntBASIC18.75■□□□□ 0.59
Gtf2bP62915 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.75■□□□□ 0.59
Gtf2bP62915 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gtf2bP62915 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gtf2bP62915 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gtf2bP62915 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Gtf2bP62915 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Gtf2bP62915 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.74■□□□□ 0.59
Gtf2bP62915 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Gtf2bP62915 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gtf2bP62915 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2bP62915 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Gtf2bP62915 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2bP62915 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2bP62915 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2bP62915 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2bP62915 Gm13559-201ENSMUST00000120476 863 ntBASIC18.73■□□□□ 0.59
Gtf2bP62915 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.73■□□□□ 0.59
Gtf2bP62915 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.73■□□□□ 0.59
Gtf2bP62915 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2bP62915 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2bP62915 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gtf2bP62915 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Gtf2bP62915 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.72■□□□□ 0.59
Gtf2bP62915 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.72■□□□□ 0.59
Gtf2bP62915 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Gtf2bP62915 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Gtf2bP62915 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Gtf2bP62915 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gtf2bP62915 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
Gtf2bP62915 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2bP62915 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2bP62915 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.71■□□□□ 0.59
Gtf2bP62915 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2bP62915 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gtf2bP62915 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2bP62915 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gtf2bP62915 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms