Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpl39P62892 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.43□□□□□ -0.42
Rpl39P62892 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.43□□□□□ -0.42
Rpl39P62892 Gm43017-201ENSMUST00000198296 752 ntBASIC12.43□□□□□ -0.42
Rpl39P62892 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rpl39P62892 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpl39P62892 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Reep4-203ENSMUST00000226563 1444 ntBASIC12.43□□□□□ -0.42
Rpl39P62892 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl39P62892 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rpl39P62892 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rpl39P62892 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl39P62892 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39P62892 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl39P62892 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39P62892 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rpl39P62892 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39P62892 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39P62892 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rpl39P62892 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Rpl39P62892 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl39P62892 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl39P62892 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpl39P62892 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl39P62892 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rpl39P62892 Gm27454-201ENSMUST00000185090 204 ntBASIC12.41□□□□□ -0.42
Rpl39P62892 Gm43060-201ENSMUST00000200621 289 ntBASIC12.41□□□□□ -0.42
Rpl39P62892 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpl39P62892 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpl39P62892 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl39P62892 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Rpl39P62892 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl39P62892 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rpl39P62892 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.4□□□□□ -0.42
Rpl39P62892 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms