Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.16■□□□□ 0.5
Usp46P62069 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.16■□□□□ 0.5
Usp46P62069 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Usp46P62069 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Usp46P62069 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp46P62069 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp46P62069 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 Gm27463-201ENSMUST00000183569 57 ntBASIC18.15■□□□□ 0.5
Usp46P62069 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp46P62069 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Usp46P62069 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp46P62069 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp46P62069 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Usp46P62069 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp46P62069 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp46P62069 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp46P62069 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp46P62069 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp46P62069 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.14■□□□□ 0.49
Usp46P62069 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp46P62069 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp46P62069 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.14■□□□□ 0.49
Usp46P62069 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.14■□□□□ 0.49
Usp46P62069 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp46P62069 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp46P62069 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Usp46P62069 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Usp46P62069 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp46P62069 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp46P62069 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.14■□□□□ 0.49
Usp46P62069 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp46P62069 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Usp46P62069 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Usp46P62069 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Gm7638-201ENSMUST00000121348 967 ntBASIC18.13■□□□□ 0.49
Usp46P62069 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.13■□□□□ 0.49
Usp46P62069 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.13■□□□□ 0.49
Usp46P62069 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.13■□□□□ 0.49
Usp46P62069 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.13■□□□□ 0.49
Usp46P62069 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.13■□□□□ 0.49
Usp46P62069 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Usp46P62069 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp46P62069 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.12■□□□□ 0.49
Usp46P62069 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp46P62069 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp46P62069 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.12■□□□□ 0.49
Usp46P62069 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp46P62069 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Usp46P62069 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp46P62069 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Usp46P62069 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp46P62069 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Usp46P62069 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp46P62069 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Usp46P62069 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp46P62069 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms