Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.41■□□□□ 0.7
Tpm1P58771 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tpm1P58771 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tpm1P58771 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.4■□□□□ 0.7
Tpm1P58771 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.4■□□□□ 0.7
Tpm1P58771 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm1P58771 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.39■□□□□ 0.7
Tpm1P58771 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tpm1P58771 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tpm1P58771 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tpm1P58771 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tpm1P58771 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.39■□□□□ 0.69
Tpm1P58771 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.39■□□□□ 0.69
Tpm1P58771 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.39■□□□□ 0.69
Tpm1P58771 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tpm1P58771 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Tpm1P58771 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tpm1P58771 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.39■□□□□ 0.69
Tpm1P58771 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm1P58771 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm1P58771 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm1P58771 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.38■□□□□ 0.69
Tpm1P58771 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm1P58771 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm1P58771 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.38■□□□□ 0.69
Tpm1P58771 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.38■□□□□ 0.69
Tpm1P58771 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Tpm1P58771 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tpm1P58771 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm1P58771 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Tpm1P58771 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm1P58771 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tpm1P58771 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.38■□□□□ 0.69
Tpm1P58771 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tpm1P58771 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tpm1P58771 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tpm1P58771 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Nespas-201ENSMUST00000143738 1083 ntBASIC19.37■□□□□ 0.69
Tpm1P58771 Gm6420-201ENSMUST00000193885 723 ntBASIC19.37■□□□□ 0.69
Tpm1P58771 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tpm1P58771 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tpm1P58771 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.36■□□□□ 0.69
Tpm1P58771 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.36■□□□□ 0.69
Tpm1P58771 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.36■□□□□ 0.69
Tpm1P58771 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Tpm1P58771 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.36■□□□□ 0.69
Tpm1P58771 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.36■□□□□ 0.69
Tpm1P58771 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tpm1P58771 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tpm1P58771 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Tpm1P58771 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms