Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nub1P54729 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nub1P54729 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.67■□□□□ 0.58
Nub1P54729 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.67■□□□□ 0.58
Nub1P54729 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.67■□□□□ 0.58
Nub1P54729 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nub1P54729 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nub1P54729 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nub1P54729 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nub1P54729 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nub1P54729 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nub1P54729 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nub1P54729 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.66■□□□□ 0.58
Nub1P54729 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nub1P54729 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.66■□□□□ 0.58
Nub1P54729 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nub1P54729 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.66■□□□□ 0.58
Nub1P54729 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nub1P54729 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nub1P54729 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nub1P54729 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nub1P54729 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nub1P54729 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nub1P54729 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nub1P54729 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.65■□□□□ 0.58
Nub1P54729 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.65■□□□□ 0.58
Nub1P54729 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nub1P54729 Gm4974-201ENSMUST00000209974 875 ntBASIC18.65■□□□□ 0.58
Nub1P54729 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nub1P54729 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nub1P54729 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nub1P54729 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nub1P54729 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.64■□□□□ 0.58
Nub1P54729 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Nub1P54729 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.64■□□□□ 0.58
Nub1P54729 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.64■□□□□ 0.57
Nub1P54729 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nub1P54729 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nub1P54729 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nub1P54729 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.64■□□□□ 0.57
Nub1P54729 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nub1P54729 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.64■□□□□ 0.57
Nub1P54729 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.64■□□□□ 0.57
Nub1P54729 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nub1P54729 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nub1P54729 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.63■□□□□ 0.57
Nub1P54729 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Nub1P54729 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Nub1P54729 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Gm715-201ENSMUST00000117865 831 ntBASIC18.63■□□□□ 0.57
Nub1P54729 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.63■□□□□ 0.57
Nub1P54729 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nub1P54729 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nub1P54729 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.62■□□□□ 0.57
Nub1P54729 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.62■□□□□ 0.57
Nub1P54729 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.62■□□□□ 0.57
Nub1P54729 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.62■□□□□ 0.57
Nub1P54729 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nub1P54729 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Nub1P54729 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms