Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Msh6P54276 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Msh6P54276 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Msh6P54276 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Msh6P54276 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Msh6P54276 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC22.08■■□□□ 1.12
Msh6P54276 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Msh6P54276 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Msh6P54276 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Msh6P54276 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Msh6P54276 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC22.07■■□□□ 1.12
Msh6P54276 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Msh6P54276 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Msh6P54276 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Msh6P54276 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Msh6P54276 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Msh6P54276 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Msh6P54276 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC22.06■■□□□ 1.12
Msh6P54276 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Msh6P54276 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC22.06■■□□□ 1.12
Msh6P54276 AC133598.3-202ENSMUST00000224219 531 ntBASIC22.06■■□□□ 1.12
Msh6P54276 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Msh6P54276 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Msh6P54276 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Msh6P54276 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Msh6P54276 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC22.05■■□□□ 1.12
Msh6P54276 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
Msh6P54276 AC120002.2-201ENSMUST00000220205 773 ntBASIC22.05■■□□□ 1.12
Msh6P54276 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Msh6P54276 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Msh6P54276 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Msh6P54276 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC22.05■■□□□ 1.12
Msh6P54276 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Msh6P54276 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Msh6P54276 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.04■■□□□ 1.12
Msh6P54276 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC22.04■■□□□ 1.12
Msh6P54276 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
Msh6P54276 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Msh6P54276 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC22.04■■□□□ 1.12
Msh6P54276 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC22.04■■□□□ 1.12
Msh6P54276 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Msh6P54276 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Msh6P54276 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Msh6P54276 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.03■■□□□ 1.12
Msh6P54276 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Msh6P54276 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Msh6P54276 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh6P54276 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC22.02■■□□□ 1.12
Msh6P54276 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh6P54276 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh6P54276 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh6P54276 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh6P54276 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh6P54276 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Msh6P54276 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.02■■□□□ 1.12
Msh6P54276 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh6P54276 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.02■■□□□ 1.12
Msh6P54276 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Msh6P54276 Gm42939-201ENSMUST00000197514 2205 ntBASIC22.02■■□□□ 1.12
Msh6P54276 AC125311.2-201ENSMUST00000227477 1940 ntBASIC22.02■■□□□ 1.12
Msh6P54276 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh6P54276 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh6P54276 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC22.01■■□□□ 1.11
Msh6P54276 Mir3081-201ENSMUST00000175305 84 ntBASIC22.01■■□□□ 1.11
Msh6P54276 Gm3272-201ENSMUST00000181181 1229 ntBASIC22.01■■□□□ 1.11
Msh6P54276 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC22.01■■□□□ 1.11
Msh6P54276 Gm44771-201ENSMUST00000206975 626 ntBASIC22.01■■□□□ 1.11
Msh6P54276 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh6P54276 Otx2os1-206ENSMUST00000228153 787 ntBASIC22.01■■□□□ 1.11
Msh6P54276 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Msh6P54276 Gm10566-201ENSMUST00000086739 996 ntBASIC22.01■■□□□ 1.11
Msh6P54276 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh6P54276 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
Msh6P54276 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh6P54276 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh6P54276 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Msh6P54276 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Msh6P54276 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC22■■□□□ 1.11
Msh6P54276 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC22■■□□□ 1.11
Msh6P54276 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC22■■□□□ 1.11
Msh6P54276 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC22■■□□□ 1.11
Msh6P54276 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Msh6P54276 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
Msh6P54276 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC22■■□□□ 1.11
Msh6P54276 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msh6P54276 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms