Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.7□□□□□ -0.06
Lhx4P53776 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Lhx4P53776 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.7□□□□□ -0.06
Lhx4P53776 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Lhx4P53776 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lhx4P53776 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.69□□□□□ -0.06
Lhx4P53776 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Gm38285-201ENSMUST00000192928 922 ntBASIC14.69□□□□□ -0.06
Lhx4P53776 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.69□□□□□ -0.06
Lhx4P53776 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.69□□□□□ -0.06
Lhx4P53776 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lhx4P53776 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.68□□□□□ -0.06
Lhx4P53776 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.68□□□□□ -0.06
Lhx4P53776 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.68□□□□□ -0.06
Lhx4P53776 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.68□□□□□ -0.06
Lhx4P53776 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Zfp783-201ENSMUST00000095946 670 ntBASIC14.68□□□□□ -0.06
Lhx4P53776 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.68□□□□□ -0.06
Lhx4P53776 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lhx4P53776 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
Lhx4P53776 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.67□□□□□ -0.06
Lhx4P53776 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lhx4P53776 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.67□□□□□ -0.06
Lhx4P53776 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lhx4P53776 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.67□□□□□ -0.06
Lhx4P53776 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Mtag2-201ENSMUST00000058665 714 ntBASIC14.67□□□□□ -0.06
Lhx4P53776 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.67□□□□□ -0.06
Lhx4P53776 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lhx4P53776 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Lhx4P53776 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Lhx4P53776 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Lhx4P53776 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.66□□□□□ -0.06
Lhx4P53776 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Lhx4P53776 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.66□□□□□ -0.06
Lhx4P53776 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.66□□□□□ -0.06
Lhx4P53776 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.66□□□□□ -0.06
Lhx4P53776 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lhx4P53776 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms