Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SftpbP50405 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 Flg-201ENSMUST00000050758 1488 ntBASIC17.8■□□□□ 0.44
SftpbP50405 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.8■□□□□ 0.44
SftpbP50405 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SftpbP50405 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.79■□□□□ 0.44
SftpbP50405 Gm8495-201ENSMUST00000188740 694 ntBASIC17.79■□□□□ 0.44
SftpbP50405 Gm26524-201ENSMUST00000192339 390 ntBASIC17.79■□□□□ 0.44
SftpbP50405 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.79■□□□□ 0.44
SftpbP50405 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SftpbP50405 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SftpbP50405 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SftpbP50405 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Mir5133-201ENSMUST00000174955 77 ntBASIC17.78■□□□□ 0.44
SftpbP50405 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SftpbP50405 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.78■□□□□ 0.44
SftpbP50405 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SftpbP50405 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SftpbP50405 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SftpbP50405 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SftpbP50405 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.77■□□□□ 0.44
SftpbP50405 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Rab3c-203ENSMUST00000224180 967 ntBASIC17.77■□□□□ 0.44
SftpbP50405 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SftpbP50405 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.77■□□□□ 0.44
SftpbP50405 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SftpbP50405 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SftpbP50405 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SftpbP50405 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.77■□□□□ 0.43
SftpbP50405 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SftpbP50405 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
SftpbP50405 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SftpbP50405 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.76■□□□□ 0.43
SftpbP50405 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SftpbP50405 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SftpbP50405 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.76■□□□□ 0.43
SftpbP50405 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SftpbP50405 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SftpbP50405 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SftpbP50405 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.76■□□□□ 0.43
SftpbP50405 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SftpbP50405 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SftpbP50405 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SftpbP50405 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SftpbP50405 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SftpbP50405 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SftpbP50405 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SftpbP50405 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
SftpbP50405 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SftpbP50405 Gm27405-201ENSMUST00000184201 112 ntBASIC17.75■□□□□ 0.43
SftpbP50405 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms